feat(backend): Add Syndarix domain models with CRUD operations

- Add Project model with slug, description, autonomy level, and settings
- Add AgentType model for agent templates with model config and failover
- Add AgentInstance model for running agents with status and memory
- Add Issue model with external tracker sync (Gitea/GitHub/GitLab)
- Add Sprint model with velocity tracking and lifecycle management
- Add comprehensive Pydantic schemas with validation
- Add full CRUD operations for all models with filtering/sorting
- Add 280+ tests for models, schemas, and CRUD operations

Implements #23, #24, #25, #26, #27

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

backend/app/models/__init__.py

@@ -23,6 +23,15 @@ from .user import User
 from .user_organization import OrganizationRole, UserOrganization
 from .user_session import UserSession
 
+# Syndarix domain models
+from .syndarix import (
+    AgentInstance,
+    AgentType,
+    Issue,
+    Project,
+    Sprint,
+)
+
 __all__ = [
     "Base",
     "OAuthAccount",
@@ -38,4 +47,10 @@ __all__ = [
     "User",
     "UserOrganization",
     "UserSession",
+    # Syndarix models
+    "AgentInstance",
+    "AgentType",
+    "Issue",
+    "Project",
+    "Sprint",
 ]

backend/app/models/syndarix/__init__.py

@@ -0,0 +1,41 @@
+# app/models/syndarix/__init__.py
+"""
+Syndarix domain models.
+
+This package contains all the core entities for the Syndarix AI consulting platform:
+- Project: Client engagements with autonomy settings
+- AgentType: Templates for AI agent capabilities
+- AgentInstance: Spawned agents working on projects
+- Issue: Units of work with external tracker sync
+- Sprint: Time-boxed iterations for organizing work
+"""
+
+from .agent_instance import AgentInstance
+from .agent_type import AgentType
+from .enums import (
+    AgentStatus,
+    AutonomyLevel,
+    IssuePriority,
+    IssueStatus,
+    ProjectStatus,
+    SprintStatus,
+    SyncStatus,
+)
+from .issue import Issue
+from .project import Project
+from .sprint import Sprint
+
+__all__ = [
+    "AgentInstance",
+    "AgentStatus",
+    "AgentType",
+    "AutonomyLevel",
+    "Issue",
+    "IssuePriority",
+    "IssueStatus",
+    "Project",
+    "ProjectStatus",
+    "Sprint",
+    "SprintStatus",
+    "SyncStatus",
+]

backend/app/models/syndarix/agent_instance.py

@@ -0,0 +1,108 @@
+# app/models/syndarix/agent_instance.py
+"""
+AgentInstance model for Syndarix AI consulting platform.
+
+An AgentInstance is a spawned instance of an AgentType, assigned to a
+specific project to perform work.
+"""
+
+from sqlalchemy import (
+    BigInteger,
+    Column,
+    DateTime,
+    Enum,
+    ForeignKey,
+    Index,
+    Integer,
+    Numeric,
+    String,
+    Text,
+)
+from sqlalchemy.dialects.postgresql import (
+    JSONB,
+    UUID as PGUUID,
+)
+from sqlalchemy.orm import relationship
+
+from app.models.base import Base, TimestampMixin, UUIDMixin
+
+from .enums import AgentStatus
+
+
+class AgentInstance(Base, UUIDMixin, TimestampMixin):
+    """
+    AgentInstance model representing a spawned agent working on a project.
+
+    Tracks:
+    - Current status and task
+    - Memory (short-term in DB, long-term reference to vector store)
+    - Session information for MCP connections
+    - Usage metrics (tasks completed, tokens, cost)
+    """
+
+    __tablename__ = "agent_instances"
+
+    # Foreign keys
+    agent_type_id = Column(
+        PGUUID(as_uuid=True),
+        ForeignKey("agent_types.id", ondelete="RESTRICT"),
+        nullable=False,
+        index=True,
+    )
+
+    project_id = Column(
+        PGUUID(as_uuid=True),
+        ForeignKey("projects.id", ondelete="CASCADE"),
+        nullable=False,
+        index=True,
+    )
+
+    # Status tracking
+    status: Column[AgentStatus] = Column(
+        Enum(AgentStatus),
+        default=AgentStatus.IDLE,
+        nullable=False,
+        index=True,
+    )
+
+    # Current task description (brief summary of what agent is doing)
+    current_task = Column(Text, nullable=True)
+
+    # Short-term memory stored in database (conversation context, recent decisions)
+    short_term_memory = Column(JSONB, default=dict, nullable=False)
+
+    # Reference to long-term memory in vector store (e.g., "project-123/agent-456")
+    long_term_memory_ref = Column(String(500), nullable=True)
+
+    # Session ID for active MCP connections
+    session_id = Column(String(255), nullable=True, index=True)
+
+    # Activity tracking
+    last_activity_at = Column(DateTime(timezone=True), nullable=True, index=True)
+    terminated_at = Column(DateTime(timezone=True), nullable=True, index=True)
+
+    # Usage metrics
+    tasks_completed = Column(Integer, default=0, nullable=False)
+    tokens_used = Column(BigInteger, default=0, nullable=False)
+    cost_incurred = Column(Numeric(precision=10, scale=4), default=0, nullable=False)
+
+    # Relationships
+    agent_type = relationship("AgentType", back_populates="instances")
+    project = relationship("Project", back_populates="agent_instances")
+    assigned_issues = relationship(
+        "Issue",
+        back_populates="assigned_agent",
+        foreign_keys="Issue.assigned_agent_id",
+    )
+
+    __table_args__ = (
+        Index("ix_agent_instances_project_status", "project_id", "status"),
+        Index("ix_agent_instances_type_status", "agent_type_id", "status"),
+        Index("ix_agent_instances_project_type", "project_id", "agent_type_id"),
+    )
+
+    def __repr__(self) -> str:
+        return (
+            f"<AgentInstance {self.id} type={self.agent_type_id} "
+            f"project={self.project_id} status={self.status.value}>"
+        )

backend/app/models/syndarix/agent_type.py

@@ -0,0 +1,72 @@
+# app/models/syndarix/agent_type.py
+"""
+AgentType model for Syndarix AI consulting platform.
+
+An AgentType is a template that defines the capabilities, personality,
+and model configuration for agent instances.
+"""
+
+from sqlalchemy import Boolean, Column, Index, String, Text
+from sqlalchemy.dialects.postgresql import JSONB
+from sqlalchemy.orm import relationship
+
+from app.models.base import Base, TimestampMixin, UUIDMixin
+
+
+class AgentType(Base, UUIDMixin, TimestampMixin):
+    """
+    AgentType model representing a template for agent instances.
+
+    Each agent type defines:
+    - Expertise areas and personality prompt
+    - Model configuration (primary, fallback, parameters)
+    - MCP server access and tool permissions
+
+    Examples: ProductOwner, Architect, BackendEngineer, QAEngineer
+    """
+
+    __tablename__ = "agent_types"
+
+    name = Column(String(255), nullable=False, index=True)
+    slug = Column(String(255), unique=True, nullable=False, index=True)
+    description = Column(Text, nullable=True)
+
+    # Areas of expertise for this agent type (e.g., ["python", "fastapi", "databases"])
+    expertise = Column(JSONB, default=list, nullable=False)
+
+    # System prompt defining the agent's personality and behavior
+    personality_prompt = Column(Text, nullable=False)
+
+    # Primary LLM model to use (e.g., "claude-opus-4-5-20251101")
+    primary_model = Column(String(100), nullable=False)
+
+    # Fallback models in order of preference
+    fallback_models = Column(JSONB, default=list, nullable=False)
+
+    # Model parameters (temperature, max_tokens, etc.)
+    model_params = Column(JSONB, default=dict, nullable=False)
+
+    # List of MCP servers this agent can connect to
+    mcp_servers = Column(JSONB, default=list, nullable=False)
+
+    # Tool permissions configuration
+    # Structure: {"allowed": ["*"], "denied": [], "require_approval": ["gitea:create_pr"]}
+    tool_permissions = Column(JSONB, default=dict, nullable=False)
+
+    # Whether this agent type is available for new instances
+    is_active = Column(Boolean, default=True, nullable=False, index=True)
+
+    # Relationships
+    instances = relationship(
+        "AgentInstance",
+        back_populates="agent_type",
+        cascade="all, delete-orphan",
+    )
+
+    __table_args__ = (
+        Index("ix_agent_types_slug_active", "slug", "is_active"),
+        Index("ix_agent_types_name_active", "name", "is_active"),
+    )
+
+    def __repr__(self) -> str:
+        return f"<AgentType {self.name} ({self.slug}) active={self.is_active}>"

backend/app/models/syndarix/enums.py

@@ -0,0 +1,123 @@
+# app/models/syndarix/enums.py
+"""
+Enums for Syndarix domain models.
+
+These enums represent the core state machines and categorizations
+used throughout the Syndarix AI consulting platform.
+"""
+
+from enum import Enum as PyEnum
+
+
+class AutonomyLevel(str, PyEnum):
+    """
+    Defines how much control the human has over agent actions.
+
+    FULL_CONTROL: Human must approve every agent action
+    MILESTONE: Human approves at sprint boundaries and major decisions
+    AUTONOMOUS: Agents work independently, only escalating critical issues
+    """
+
+    FULL_CONTROL = "full_control"
+    MILESTONE = "milestone"
+    AUTONOMOUS = "autonomous"
+
+
+class ProjectStatus(str, PyEnum):
+    """
+    Project lifecycle status.
+
+    ACTIVE: Project is actively being worked on
+    PAUSED: Project is temporarily on hold
+    COMPLETED: Project has been delivered successfully
+    ARCHIVED: Project is no longer accessible for work
+    """
+
+    ACTIVE = "active"
+    PAUSED = "paused"
+    COMPLETED = "completed"
+    ARCHIVED = "archived"
+
+
+class AgentStatus(str, PyEnum):
+    """
+    Current operational status of an agent instance.
+
+    IDLE: Agent is available but not currently working
+    WORKING: Agent is actively processing a task
+    WAITING: Agent is waiting for external input or approval
+    PAUSED: Agent has been manually paused
+    TERMINATED: Agent instance has been shut down
+    """
+
+    IDLE = "idle"
+    WORKING = "working"
+    WAITING = "waiting"
+    PAUSED = "paused"
+    TERMINATED = "terminated"
+
+
+class IssueStatus(str, PyEnum):
+    """
+    Issue workflow status.
+
+    OPEN: Issue is ready to be worked on
+    IN_PROGRESS: Agent or human is actively working on the issue
+    IN_REVIEW: Work is complete, awaiting review
+    BLOCKED: Issue cannot proceed due to dependencies or blockers
+    CLOSED: Issue has been completed or cancelled
+    """
+
+    OPEN = "open"
+    IN_PROGRESS = "in_progress"
+    IN_REVIEW = "in_review"
+    BLOCKED = "blocked"
+    CLOSED = "closed"
+
+
+class IssuePriority(str, PyEnum):
+    """
+    Issue priority levels.
+
+    LOW: Nice to have, can be deferred
+    MEDIUM: Standard priority, should be done
+    HIGH: Important, should be prioritized
+    CRITICAL: Must be done immediately, blocking other work
+    """
+
+    LOW = "low"
+    MEDIUM = "medium"
+    HIGH = "high"
+    CRITICAL = "critical"
+
+
+class SyncStatus(str, PyEnum):
+    """
+    External issue tracker synchronization status.
+
+    SYNCED: Local and remote are in sync
+    PENDING: Local changes waiting to be pushed
+    CONFLICT: Merge conflict between local and remote
+    ERROR: Synchronization failed due to an error
+    """
+
+    SYNCED = "synced"
+    PENDING = "pending"
+    CONFLICT = "conflict"
+    ERROR = "error"
+
+
+class SprintStatus(str, PyEnum):
+    """
+    Sprint lifecycle status.
+
+    PLANNED: Sprint has been created but not started
+    ACTIVE: Sprint is currently in progress
+    COMPLETED: Sprint has been finished successfully
+    CANCELLED: Sprint was cancelled before completion
+    """
+
+    PLANNED = "planned"
+    ACTIVE = "active"
+    COMPLETED = "completed"
+    CANCELLED = "cancelled"

backend/app/models/syndarix/issue.py

@@ -0,0 +1,133 @@
+# app/models/syndarix/issue.py
+"""
+Issue model for Syndarix AI consulting platform.
+
+An Issue represents a unit of work that can be assigned to agents or humans,
+with optional synchronization to external issue trackers (Gitea, GitHub, GitLab).
+"""
+
+from sqlalchemy import Column, DateTime, Enum, ForeignKey, Index, Integer, String, Text
+from sqlalchemy.dialects.postgresql import (
+    JSONB,
+    UUID as PGUUID,
+)
+from sqlalchemy.orm import relationship
+
+from app.models.base import Base, TimestampMixin, UUIDMixin
+
+from .enums import IssuePriority, IssueStatus, SyncStatus
+
+
+class Issue(Base, UUIDMixin, TimestampMixin):
+    """
+    Issue model representing a unit of work in a project.
+
+    Features:
+    - Standard issue fields (title, body, status, priority)
+    - Assignment to agent instances or human assignees
+    - Sprint association for backlog management
+    - External tracker synchronization (Gitea, GitHub, GitLab)
+    """
+
+    __tablename__ = "issues"
+
+    # Foreign key to project
+    project_id = Column(
+        PGUUID(as_uuid=True),
+        ForeignKey("projects.id", ondelete="CASCADE"),
+        nullable=False,
+        index=True,
+    )
+
+    # Issue content
+    title = Column(String(500), nullable=False)
+    body = Column(Text, nullable=False, default="")
+
+    # Status and priority
+    status: Column[IssueStatus] = Column(
+        Enum(IssueStatus),
+        default=IssueStatus.OPEN,
+        nullable=False,
+        index=True,
+    )
+
+    priority: Column[IssuePriority] = Column(
+        Enum(IssuePriority),
+        default=IssuePriority.MEDIUM,
+        nullable=False,
+        index=True,
+    )
+
+    # Labels for categorization (e.g., ["bug", "frontend", "urgent"])
+    labels = Column(JSONB, default=list, nullable=False)
+
+    # Assignment - either to an agent or a human (mutually exclusive)
+    assigned_agent_id = Column(
+        PGUUID(as_uuid=True),
+        ForeignKey("agent_instances.id", ondelete="SET NULL"),
+        nullable=True,
+        index=True,
+    )
+
+    # Human assignee (username or email, not a FK to allow external users)
+    human_assignee = Column(String(255), nullable=True, index=True)
+
+    # Sprint association
+    sprint_id = Column(
+        PGUUID(as_uuid=True),
+        ForeignKey("sprints.id", ondelete="SET NULL"),
+        nullable=True,
+        index=True,
+    )
+
+    # Story points for estimation
+    story_points = Column(Integer, nullable=True)
+
+    # External tracker integration
+    external_tracker = Column(
+        String(50),
+        nullable=True,
+        index=True,
+    )  # 'gitea', 'github', 'gitlab'
+
+    external_id = Column(String(255), nullable=True)  # External system's ID
+    external_url = Column(String(1000), nullable=True)  # Link to external issue
+    external_number = Column(Integer, nullable=True)  # Issue number (e.g., #123)
+
+    # Sync status with external tracker
+    sync_status: Column[SyncStatus] = Column(
+        Enum(SyncStatus),
+        default=SyncStatus.SYNCED,
+        nullable=False,
+        # Note: Index defined in __table_args__ as ix_issues_sync_status
+    )
+
+    last_synced_at = Column(DateTime(timezone=True), nullable=True)
+    external_updated_at = Column(DateTime(timezone=True), nullable=True)
+
+    # Lifecycle timestamp
+    closed_at = Column(DateTime(timezone=True), nullable=True, index=True)
+
+    # Relationships
+    project = relationship("Project", back_populates="issues")
+    assigned_agent = relationship(
+        "AgentInstance",
+        back_populates="assigned_issues",
+        foreign_keys=[assigned_agent_id],
+    )
+    sprint = relationship("Sprint", back_populates="issues")
+
+    __table_args__ = (
+        Index("ix_issues_project_status", "project_id", "status"),
+        Index("ix_issues_project_priority", "project_id", "priority"),
+        Index("ix_issues_project_sprint", "project_id", "sprint_id"),
+        Index("ix_issues_external_tracker_id", "external_tracker", "external_id"),
+        Index("ix_issues_sync_status", "sync_status"),
+        Index("ix_issues_project_agent", "project_id", "assigned_agent_id"),
+    )
+
+    def __repr__(self) -> str:
+        return (
+            f"<Issue {self.id} title='{self.title[:30]}...' "
+            f"status={self.status.value} priority={self.priority.value}>"
+        )

backend/app/models/syndarix/project.py

@@ -0,0 +1,88 @@
+# app/models/syndarix/project.py
+"""
+Project model for Syndarix AI consulting platform.
+
+A Project represents a client engagement where AI agents collaborate
+to deliver software solutions.
+"""
+
+from sqlalchemy import Column, Enum, ForeignKey, Index, String, Text
+from sqlalchemy.dialects.postgresql import (
+    JSONB,
+    UUID as PGUUID,
+)
+from sqlalchemy.orm import relationship
+
+from app.models.base import Base, TimestampMixin, UUIDMixin
+
+from .enums import AutonomyLevel, ProjectStatus
+
+
+class Project(Base, UUIDMixin, TimestampMixin):
+    """
+    Project model representing a client engagement.
+
+    A project contains:
+    - Configuration for how autonomous agents should operate
+    - Settings for MCP server integrations
+    - Relationship to assigned agents, issues, and sprints
+    """
+
+    __tablename__ = "projects"
+
+    name = Column(String(255), nullable=False, index=True)
+    slug = Column(String(255), unique=True, nullable=False, index=True)
+    description = Column(Text, nullable=True)
+
+    autonomy_level: Column[AutonomyLevel] = Column(
+        Enum(AutonomyLevel),
+        default=AutonomyLevel.MILESTONE,
+        nullable=False,
+        index=True,
+    )
+
+    status: Column[ProjectStatus] = Column(
+        Enum(ProjectStatus),
+        default=ProjectStatus.ACTIVE,
+        nullable=False,
+        index=True,
+    )
+
+    # JSON field for flexible project configuration
+    # Can include: mcp_servers, webhook_urls, notification_settings, etc.
+    settings = Column(JSONB, default=dict, nullable=False)
+
+    # Foreign key to the User who owns this project
+    owner_id = Column(
+        PGUUID(as_uuid=True),
+        ForeignKey("users.id", ondelete="SET NULL"),
+        nullable=True,
+        index=True,
+    )
+
+    # Relationships
+    owner = relationship("User", foreign_keys=[owner_id])
+    agent_instances = relationship(
+        "AgentInstance",
+        back_populates="project",
+        cascade="all, delete-orphan",
+    )
+    issues = relationship(
+        "Issue",
+        back_populates="project",
+        cascade="all, delete-orphan",
+    )
+    sprints = relationship(
+        "Sprint",
+        back_populates="project",
+        cascade="all, delete-orphan",
+    )
+
+    __table_args__ = (
+        Index("ix_projects_slug_status", "slug", "status"),
+        Index("ix_projects_owner_status", "owner_id", "status"),
+        Index("ix_projects_autonomy_status", "autonomy_level", "status"),
+    )
+
+    def __repr__(self) -> str:
+        return f"<Project {self.name} ({self.slug}) status={self.status.value}>"

backend/app/models/syndarix/sprint.py

@@ -0,0 +1,74 @@
+# app/models/syndarix/sprint.py
+"""
+Sprint model for Syndarix AI consulting platform.
+
+A Sprint represents a time-boxed iteration for organizing and delivering work.
+"""
+
+from sqlalchemy import Column, Date, Enum, ForeignKey, Index, Integer, String, Text
+from sqlalchemy.dialects.postgresql import UUID as PGUUID
+from sqlalchemy.orm import relationship
+
+from app.models.base import Base, TimestampMixin, UUIDMixin
+
+from .enums import SprintStatus
+
+
+class Sprint(Base, UUIDMixin, TimestampMixin):
+    """
+    Sprint model representing a time-boxed iteration.
+
+    Tracks:
+    - Sprint metadata (name, number, goal)
+    - Date range (start/end)
+    - Progress metrics (planned vs completed points)
+    """
+
+    __tablename__ = "sprints"
+
+    # Foreign key to project
+    project_id = Column(
+        PGUUID(as_uuid=True),
+        ForeignKey("projects.id", ondelete="CASCADE"),
+        nullable=False,
+        index=True,
+    )
+
+    # Sprint identification
+    name = Column(String(255), nullable=False)
+    number = Column(Integer, nullable=False)  # Sprint number within project
+
+    # Sprint goal (what we aim to achieve)
+    goal = Column(Text, nullable=True)
+
+    # Date range
+    start_date = Column(Date, nullable=False, index=True)
+    end_date = Column(Date, nullable=False, index=True)
+
+    # Status
+    status: Column[SprintStatus] = Column(
+        Enum(SprintStatus),
+        default=SprintStatus.PLANNED,
+        nullable=False,
+        index=True,
+    )
+
+    # Progress metrics
+    planned_points = Column(Integer, nullable=True)  # Sum of story points at start
+    completed_points = Column(Integer, nullable=True)  # Sum of completed story points
+
+    # Relationships
+    project = relationship("Project", back_populates="sprints")
+    issues = relationship("Issue", back_populates="sprint")
+
+    __table_args__ = (
+        Index("ix_sprints_project_status", "project_id", "status"),
+        Index("ix_sprints_project_number", "project_id", "number"),
+        Index("ix_sprints_date_range", "start_date", "end_date"),
+    )
+
+    def __repr__(self) -> str:
+        return (
+            f"<Sprint {self.name} (#{self.number}) "
+            f"project={self.project_id} status={self.status.value}>"
+        )