Add MCP-compatible tools that expose memory operations to agents:
Tools implemented:
- remember: Store data in working, episodic, semantic, or procedural memory
- recall: Retrieve memories by query across multiple memory types
- forget: Delete specific keys or bulk delete by pattern
- reflect: Analyze patterns in recent episodes (success/failure factors)
- get_memory_stats: Return usage statistics and breakdowns
- search_procedures: Find procedures matching trigger patterns
- record_outcome: Record task outcomes and update procedure success rates
Key components:
- tools.py: Pydantic schemas for tool argument validation with comprehensive
field constraints (importance 0-1, TTL limits, limit ranges)
- service.py: MemoryToolService coordinating memory type operations with
proper scoping via ToolContext (project_id, agent_instance_id, session_id)
- Lazy initialization of memory services (WorkingMemory, EpisodicMemory,
SemanticMemory, ProceduralMemory)
Test coverage:
- 60 tests covering tool definitions, argument validation, and service
execution paths
- Mock-based tests for all memory type interactions
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
- Add MemoryConsolidationService with Working→Episodic→Semantic/Procedural transfer
- Add Celery tasks for session and nightly consolidation
- Implement memory pruning with importance-based retention
- Add comprehensive test suite (32 tests)
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Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Add comprehensive indexing and retrieval system for memory search:
- VectorIndex for semantic similarity search using cosine similarity
- TemporalIndex for time-based queries with range and recency support
- EntityIndex for entity-based lookups with multi-entity intersection
- OutcomeIndex for success/failure filtering on episodes
- MemoryIndexer as unified interface for all index types
- RetrievalEngine with hybrid search combining all indices
- RelevanceScorer for multi-signal relevance scoring
- RetrievalCache for LRU caching of search results
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Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Add scope management system for hierarchical memory access:
- ScopeManager with hierarchy: Global → Project → Agent Type → Agent Instance → Session
- ScopePolicy for access control (read, write, inherit permissions)
- ScopeResolver for resolving queries across scope hierarchies with inheritance
- ScopeFilter for filtering scopes by type, project, or agent
- Access control enforcement with parent scope visibility
- Deduplication support during resolution across scopes
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Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Implements procedural memory for learned skills and procedures:
Core functionality:
- ProceduralMemory class for procedure storage/retrieval
- record_procedure with duplicate detection and step merging
- find_matching for context-based procedure search
- record_outcome for success/failure tracking
- get_best_procedure for finding highest success rate
- update_steps for procedure refinement
Supporting modules:
- ProcedureMatcher: Keyword-based procedure matching
- MatchResult/MatchContext: Matching result types
- Success rate weighting in match scoring
Test coverage:
- 43 unit tests covering all modules
- matching.py: 97% coverage
- memory.py: 86% coverage
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Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Implements the episodic memory service for storing and retrieving
agent task execution experiences. This enables learning from past
successes and failures.
Components:
- EpisodicMemory: Main service class combining recording and retrieval
- EpisodeRecorder: Handles episode creation, importance scoring
- EpisodeRetriever: Multiple retrieval strategies (recency, semantic,
outcome, importance, task type)
Key features:
- Records task completions with context, actions, outcomes
- Calculates importance scores based on outcome, duration, lessons
- Semantic search with fallback to recency when embeddings unavailable
- Full CRUD operations with statistics and summarization
- Comprehensive unit tests (50 tests, all passing)
Closes#90🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Implements session-scoped ephemeral memory with:
Storage Backends:
- InMemoryStorage: Thread-safe fallback with TTL support and capacity limits
- RedisStorage: Primary storage with connection pooling and JSON serialization
- Auto-fallback from Redis to in-memory when unavailable
WorkingMemory Class:
- Key-value storage with TTL and reserved key protection
- Task state tracking with progress updates
- Scratchpad for reasoning steps with timestamps
- Checkpoint/snapshot support for recovery
- Factory methods for auto-configured storage
Tests:
- 55 unit tests covering all functionality
- Tests for basic ops, TTL, capacity, concurrency
- Tests for task state, scratchpad, checkpoints
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Implements Sub-Issue #87 of Issue #62 (Agent Memory System).
Core infrastructure:
- memory/types.py: Type definitions for all memory types (Working, Episodic,
Semantic, Procedural) with enums for MemoryType, ScopeLevel, Outcome
- memory/config.py: MemorySettings with MEM_ env prefix, thread-safe singleton
- memory/exceptions.py: Comprehensive exception hierarchy for memory operations
- memory/manager.py: MemoryManager facade with placeholder methods
Directory structure:
- working/: Working memory (Redis/in-memory) - to be implemented in #89
- episodic/: Episodic memory (experiences) - to be implemented in #90
- semantic/: Semantic memory (facts) - to be implemented in #91
- procedural/: Procedural memory (skills) - to be implemented in #92
- scoping/: Scope management - to be implemented in #93
- indexing/: Vector indexing - to be implemented in #94
- consolidation/: Memory consolidation - to be implemented in #95
Tests: 71 unit tests for config, types, and exceptions
Docs: Comprehensive implementation plan at docs/architecture/memory-system-plan.md
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Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
- Added detailed unit tests for `/context` endpoints, covering health checks, context assembly, token counting, budget retrieval, and cache invalidation.
- Included edge cases, error handling, and input validation for context-related operations.
- Improved test coverage for the Context Management module with mocked dependencies and integration scenarios.
- Introduced end-to-end tests for MCP workflows, including server discovery, authentication, context engine operations, error handling, and input validation.
- Added full lifecycle tests for agent workflows, covering type management, instance spawning, status transitions, and admin-only operations.
- Enhanced test coverage for real-world MCP and Agent scenarios across PostgreSQL and async environments.
- Introduced integration tests covering backend, LLM Gateway, Knowledge Base, and Context Engine.
- Includes health checks, tool listing, token counting, and end-to-end MCP flows.
- Added `RUN_INTEGRATION_TESTS` environment flag to enable selective test execution.
- Includes a quick health check script to verify service availability before running tests.
- Added timeout enforcement for token counting, scoring, and compression with detailed error handling.
- Introduced tenant isolation in context caching using project and agent identifiers.
- Enhanced budget management with stricter checks for critical context overspending and buffer limitations.
- Optimized per-context locking with cleanup to prevent memory leaks in concurrent environments.
- Updated default assembly timeout settings for improved performance and reliability.
- Improved XML escaping in Claude adapter for safety against injection attacks.
- Standardized token estimation using model-specific ratios.
- Cleaned up unnecessary comments in `__all__` definitions for better readability.
- Adjusted indentation and formatting across modules for improved clarity (e.g., long lines, logical grouping).
- Simplified conditional expressions and inline comments for context scoring and ranking.
- Replaced some hard-coded values with type-safe annotations (e.g., `ClassVar`).
- Removed unused imports and ensured consistent usage across test files.
- Updated `test_score_not_cached_on_context` to clarify caching behavior.
- Improved truncation strategy logic and marker handling.
- Add tests for truncation edge cases, including zero tokens, short content, and marker handling.
- Add concurrency tests for scoring to verify per-context locking and handling of multiple contexts.
Phase 7 of Context Management Engine - Main Engine:
- Add ContextEngine as main orchestration class
- Integrate all components: calculator, scorer, ranker, compressor, cache
- Add high-level assemble_context() API with:
- System prompt support
- Task description support
- Knowledge Base integration via MCP
- Conversation history conversion
- Tool results conversion
- Custom contexts support
- Add helper methods:
- get_budget_for_model()
- count_tokens() with caching
- invalidate_cache()
- get_stats()
- Add create_context_engine() factory function
Tests: 26 new tests, 311 total context tests passing
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Phase 5 of Context Management Engine - Model Adapters:
- Add ModelAdapter abstract base class with model matching
- Add DefaultAdapter for unknown models (plain text)
- Add ClaudeAdapter with XML-based formatting:
- <system_instructions> for system context
- <reference_documents>/<document> for knowledge
- <conversation_history>/<message> for chat
- <tool_results>/<tool_result> for tool outputs
- XML escaping for special characters
- Add OpenAIAdapter with markdown formatting:
- ## headers for sections
- ### Source headers for documents
- **ROLE** bold labels for conversation
- Code blocks for tool outputs
- Add get_adapter() factory function for model selection
Tests: 33 new tests, 256 total context tests passing
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Add TokenCalculator with LLM Gateway integration for accurate token
counting with in-memory caching and fallback character-based estimation.
Implement TokenBudget for tracking allocations per context type with
budget enforcement, and BudgetAllocator for creating budgets based on
model context window sizes.
- TokenCalculator: MCP integration, caching, model-specific ratios
- TokenBudget: allocation tracking, can_fit/allocate/deallocate/reset
- BudgetAllocator: model context sizes, budget creation and adjustment
- 35 comprehensive tests covering all budget functionality
Part of #61 - Context Management Engine
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Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
- Added `record_action` in `RateLimiter` for precise tracking of slot consumption post-validation.
- Introduced deduplication mechanism for warning alerts in `CostController` to prevent spamming.
- Refactored `CostController`'s session and daily budget alert handling for improved clarity.
- Implemented test suites for `CostController` and `SafetyGuardian` to validate changes.
- Expanded integration testing to cover deduplication, validation, and loop detection edge cases.
Improved code readability and uniformity by standardizing line breaks, indentation, and inline conditions across safety-related services, models, and tests, including content filters, validation rules, and emergency controls.
The delay2 and delay3 variables were calculated but never asserted,
causing lint warnings. Added assertions to verify all delays are
positive and within max bounds.
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Core MCP client implementation with comprehensive tooling:
**Services:**
- MCPClientManager: Main facade for all MCP operations
- MCPServerRegistry: Thread-safe singleton for server configs
- ConnectionPool: Connection pooling with auto-reconnection
- ToolRouter: Automatic tool routing with circuit breaker
- AsyncCircuitBreaker: Custom async-compatible circuit breaker
**Configuration:**
- YAML-based config with Pydantic models
- Environment variable expansion support
- Transport types: HTTP, SSE, STDIO
**API Endpoints:**
- GET /mcp/servers - List all MCP servers
- GET /mcp/servers/{name}/tools - List server tools
- GET /mcp/tools - List all tools from all servers
- GET /mcp/health - Health check all servers
- POST /mcp/call - Execute tool (admin only)
- GET /mcp/circuit-breakers - Circuit breaker status
- POST /mcp/circuit-breakers/{name}/reset - Reset circuit breaker
- POST /mcp/servers/{name}/reconnect - Force reconnection
**Testing:**
- 156 unit tests with comprehensive coverage
- Tests for all services, routes, and error handling
- Proper mocking and async test support
**Documentation:**
- MCP_CLIENT.md with usage examples
- Phase 2+ workflow documentation
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
- Added tests for OAuth provider admin and consent endpoints covering edge cases.
- Extended agent-related tests to handle incorrect project associations and lifecycle state transitions.
- Introduced tests for sprint status transitions and validation checks.
- Improved multiline formatting consistency across all test functions.
Bug Fixes:
- bulk_terminate_by_project now unassigns issues before terminating agents
to prevent orphaned issue assignments
- PATCH /issues/{id} now validates sprint status - cannot assign issues
to COMPLETED or CANCELLED sprints
- archive_project now performs cascading cleanup:
- Terminates all active agent instances
- Cancels all planned/active sprints
- Unassigns issues from terminated agents
Added edge case tests for all fixed bugs (19 new tests total):
- TestBulkTerminateEdgeCases
- TestSprintStatusValidation
- TestArchiveProjectCleanup
- TestDataIntegrityEdgeCases (IDOR protection)
Coverage: 93% (1836 tests passing)
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
This commit fixes 4 production bugs found via edge case testing:
1. BUG: System allowed assigning issues to terminated agents
- Added validation in issue creation endpoint
- Added validation in issue update endpoint
- Added validation in issue assign endpoint
2. BUG: Issues remained orphaned when agent was terminated
- Agent termination now auto-unassigns all issues from that agent
These bugs could lead to issues being assigned to non-functional agents
that would never work on them, causing work to stall silently.
Tests added in tests/api/routes/syndarix/test_edge_cases.py to verify:
- Cannot assign issue to terminated agent (3 variations)
- Issues are auto-unassigned when agent is terminated
- Various other edge cases (sprints, projects, IDOR protection)
Coverage: 88% → 93% (1830 tests passing)
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Add 22 tests for agents API covering:
- CRUD operations (spawn, list, get, update, delete)
- Lifecycle management (pause, resume)
- Agent metrics (single and project-level)
- Authorization and access control
- Status filtering
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Add 24 tests for issues API covering:
- CRUD operations (create, list, get, update, delete)
- Status and priority filtering
- Search functionality
- Issue statistics
- Authorization and access control
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Add 46 tests for projects API covering:
- CRUD operations (create, list, get, update, archive)
- Lifecycle management (pause, resume)
- Authorization and access control
- Pagination and filtering
- All autonomy levels
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Infrastructure:
- Add Redis and Celery workers to all docker-compose files
- Fix celery migration race condition in entrypoint.sh
- Add healthchecks and resource limits to dev compose
- Update .env.template with Redis/Celery variables
Backend Models & Schemas:
- Rename Sprint.completed_points to velocity (per requirements)
- Add AgentInstance.name as required field
- Rename Issue external tracker fields for consistency
- Add IssueSource and TrackerType enums
- Add Project.default_tracker_type field
Backend Fixes:
- Add Celery retry configuration with exponential backoff
- Remove unused sequence counter from EventBus
- Add mypy overrides for test dependencies
- Fix test file using wrong schema (UserUpdate -> dict)
Frontend Fixes:
- Fix memory leak in useProjectEvents (proper cleanup)
- Fix race condition with stale closure in reconnection
- Sync TokenWithUser type with regenerated API client
- Fix expires_in null handling in useAuth
- Clean up unused imports in prototype pages
- Add ESLint relaxed rules for prototype files
CI/CD:
- Add E2E testing stage with Testcontainers
- Add security scanning with Trivy and pip-audit
- Add dependency caching for faster builds
Tests:
- Update all tests to use renamed fields (velocity, name, etc.)
- Fix 14 schema test failures
- All 1500 tests pass with 91% coverage
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
- Add Project model with slug, description, autonomy level, and settings
- Add AgentType model for agent templates with model config and failover
- Add AgentInstance model for running agents with status and memory
- Add Issue model with external tracker sync (Gitea/GitHub/GitLab)
- Add Sprint model with velocity tracking and lifecycle management
- Add comprehensive Pydantic schemas with validation
- Add full CRUD operations for all models with filtering/sorting
- Add 280+ tests for models, schemas, and CRUD operations
Implements #23, #24, #25, #26, #27🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
- Renamed unused `code_verifier` variables to `_code_verifier` for clarity.
- Improved test readability by reformatting long lines and assertions.
- Streamlined `get` request calls by consolidating parameters into single lines.
- Implemented OAuth 2.0 Authorization Server endpoints per RFCs, including token, introspection, revocation, and metadata discovery.
- Added user consent submission, listing, and revocation APIs alongside frontend integration for improved UX.
- Enforced stricter OAuth security measures (PKCE, state validation, scopes).
- Refactored schemas and services for consistency and expanded coverage of OAuth workflows.
- Updated documentation and type definitions for new API behaviors.
